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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched … transformative bio-based technologies that address challenges in the sourcing, recovery, and utilization of … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field samples. Depending on the …
Learn more
Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … as what we initiated our search around. And so we found examples of those, and then looked for NRPSs nearby, …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … products systems. This conversation came about because he challenged me on my use of the term “secondary metabolism.” … work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can …
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Natural Prodcast Episode 16: Marcy Balunas
… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … about something I can kind of see like the squid and the bacteria and how the chemistry is going back and forth … in the same place on the chromosome then you’ve definitely found a biosynthetic gene cluster.  And so those are really …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … find, things that are of interest. And usually, in terms of bacteria and secondary metabolism, those things that we want … sequencing if you were rich enough. [CHUCKLES] And once you found a little piece of something that looked like it was a …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports on the evolution … they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … colleagues. Aaron is doing some cool stuff with cool bacteria that I’m fascinated to learn more about. He works … AARON PURI: Yeah. Yeah. So the more recent one that they found, which has a lot more structural diversity — so that …
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Mission
… expertise to support the global research community in studies of complex biological and environmental systems. … our service to the community through responsibly managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …
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Natural Prodcast Episode 20: Brian Bachmann
… supposed to be orthogonal. And then we much to our chagrin found that they had the same conserved polyketide synthase … in the marine ecosystems and marine actinomycetes and cyanobacteria. And we thought we could also– let’s see what caves … –what you need is what JGI is providing, which is a giant warehouse full of microbial sequences. So let’s say …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome … that people were looking for in the soil kept getting found over and over again. So we call this the “rediscovery … So, one of those is Acinetibacter . This is a genus of bacteria that’s really popped up at funding agencies and the …
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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … a focus on addressing critical energy and environmental challenges. Through innovative research in synthetic …
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