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I think this is really– I personally like this really as a model for a collaboration. You have your code as open source … I wish I could use this tool. I don’t have this kind of research area though, so. Dan Udwary: You can, Alison, … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well beyond genome annotation and … KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data Resources are authoritative providers …

… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … better understand the plant-associated terrestrial world. Research Team    … Plant microbiomes hold the amazing … phage function in this tripartite plant-bacterial-phage model system. We seek to expand beyond this model system by …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, …

… renewable energy and agricultural productivity. Research spans diverse areas — from understanding how … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … learning algorithms for gene annotation and protein folding models, to improve the accuracy of functional predictions …

… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … in carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic potential into practical applications, including …

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel … relevance to DOE’s Office of Biological and Environmental Research (BER) missions .  While applications will be … are of relevance to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly …

We had a really beautiful fermentation development lab and research lab all the way from Ambr250 fermenters to 2 liter … as the fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, …

The central mission of the JGI’s Genomic Technologies department is   … access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … and computational tools, the program supports foundational research related to soil nutrient cycling and health, …

… in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as target … of Energy missions. Click to learn more.   … SPPs enable research funded by an Industry partner to perform a defined … genome engineering (CRAGE), which offers single-step genomic integration and prototyping of complex pathways. The …