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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and …
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Identification of a Novel Nematotoxic Protein by Challenging the Model Mushroom Coprinopsis cinerea with a Fungivorous Nematode
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … with gene expression, providing deeper insights into functional genomics. A key focus is understanding the …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … integrated context. IMG/M provides tools for analyzing the functional capability of microbial communities based on … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … by bacterial or fungal metabolism by microbes, will have a functional role. We started from that. Evolution doesn’t … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …
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CSP Large Scale Call
… is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an …
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