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… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … studied chemistry, because she switched her degree program from geography to chemistry. So we were both enrolled as … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …

… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … Some plants and fungi have mutually beneficial (e.g., mycorrhizal) relationships, but not all plants and fungi can …

DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced …

Three stories of JGI-supported research, connected to nutrient … into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and Benjamin … their research on the symbiotic relationship between mycorrhizal fungi and plant roots.  …

… that showcase our collaborations and capabilities to enable great science that will help solve energy and … genome sequenced. Having this first genome sequence of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader …

… systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find … bacteria make antibiotics in order to challenge or kill off competition, right? And plants do the same sorts of things. …

… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … that there wasn’t enough application there. And so I moved from there to plant natural products, getting a PhD in … there are less nutrients there, so there would be more competition and so you would maybe expect more bioactive – …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … you’ll be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like … OK. Yeah, I would imagine– what? There must be a lot of competition as the lake gets smaller. These organisms that …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access … such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). …