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Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to … about natural products. So in Brad’s lab, I worked on identifying and characterizing haloperoxidases from bacteria. And … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …

The publications resulting from such efforts should specify the collaborative nature of the project, and authorship … Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the … Search for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …

… can we utilize sequences of these TetRs to identify what molecule might bind them and then allow for their … so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you expect … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …

… on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated … Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized quantitative analysis strategy for … .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, …

… we are today, recording today. BRIAN BACHMANN: Yeah, in the year 2000. And I was trying to figure out what to do with … how much blood, sweat, and tears went into trying to identify that you had the right cluster before you sent it out for … at the end: Henry Schares:  https://sim.confex.com/sim/np2023/meetingapp.cgi/Paper/46926 Jen Wurm:  …

Microbiology conference that took place in January this year in San Diego, and that city is where I first met Roger, … published literature for the past hundred years and identify every article which describes the discovery of a … internally by making a list on the whiteboard of the top 50 journals that we thought were most likely to contain …

… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … by contacting the collaborator listed on the “info” page for that organism on the Genome Portal . … You can view … are released to the public via JGI portals and the NCBI a year after generation.  Read More about our policies. … …

The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations … Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics …

… chemical biology, a lot of which people classify as tool building. So I worked with a really great guy … AARON PURI: Sure. Great. I have a job for a couple of years. But the other thing that we can do that we’ve been … genes and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …

… the amazing John Faulkner’s work, who passed away about 17 years ago now. It looked really interesting. He was … them. And so there’s a long history. There’s, I think, 60 years of history now of people looking at sponge chemistry … for the last 10 years in this area. ALISON:  Just a clarifying question, like small molecule versus peptide. It’s the …

It was actually when I was traveling at the end of first year University. Quite a lot of people in Europe do this … like. I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. …

… has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … And so a path opened itself to me, just before my senior year of college, a chance to go to the Amazon and work with … they were starting to show the ability to really identify, and get crystal structures out of these mixed powders, …