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… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Conservative taxonomy and quality assessment of giant virus genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … if you ended up here somehow without having listened to the first part, you might be a little lost, and I’d suggest you … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward advancing … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in … at CIRAD was supported by the International Consortium for Sugarcane Biotechnology. The work at the Institute of …

… Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 …

… Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … with the computer work, right? Which I had to get into first, and the standing trees. And he had this whole idea of … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … uncertain whether that meeting was going to happen in the first place. And yet everything got canceled due to the …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Prodcast. It’s been about a month now since we dropped our first six episodes, and now after gathering some feedback … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … may elect titles to their own inventions and have the first right to negotiate a license to Lab inventions … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve done since that first … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …

… two things I wanted to tell you about in this introduction. First and foremost, our interview this week is with … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …