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Natural Prodcast Episode 12: Nadine Ziemert
… the pandemic in Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun … with the computer work, right? Which I had to get into first, and the standing trees. And he had this whole idea of … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… back for our second season of Natural Prodcast. This first episode up is another primer episode. These are … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … from the GEM catalog (in green) and previously existing reference genomes (in gray). Around the phylogenetic tree, …
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Natural Prodcast Episode 7: Ben Shen
Prodcast. It’s been about a month now since we dropped our first six episodes, and now after gathering some feedback … delivery mechanism. So, the polymer structure has specific preferences to cancer cell lines. So, that was introduced in … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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Natural Prodcast Episode 22: Alison Narayan
NARAYAN: I think that’s fair. And I always use it as the first word in the title of my talk, 100% fair for you to … you can’t get to the second part without exploring the first part. And so I would say we don’t necessarily develop … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
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FICUS-NERSC/KBASE
… … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …
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Data Policy
… embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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Synthesis
… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Natural Prodcast Episode 3: The Primer, Part 3
… episodes. This IS the third part, so if this is the first episode you’re checking out, you probably want to go back and listen to the first two parts ( part 1 is here and part 2 is here ) so you … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the …
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Natural Prodcast Episode 23: Aaron Puri
… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … briefly when you were looking at these genomes for the first time getting excited about this. And so you find these … factor. These can diffuse in and out of the cell to a first approximation. DAN: Sure. Sure. Sure. Yeah. AARON …
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Disclaimer
… that its use would not infringe privately owned rights. … Reference herein to any specific commercial products, … is not responsible for the contents of any off-site pages referenced. … Disclaimer of Liability … Disclaimer of …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the … of related candidate bioenergy feedstock crops such as sugarcane and sorghum. The M. sinensis genome analysis …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these …
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