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Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … So that’s– so that could be an example of convergent evolution, but just speculating there. But it’s interesting …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … in more detail. Especially if you want to look at the evolution of these gene clusters, for example, you really … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … understand that a little bit better, with some advances in evolution and cell biology. I’m interested in that. And we …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … with little to no genetic tools enabling heterologous expression and functional exploration.  The developed …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could provide more insights …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching for new branches on the tree of life. …