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CSP Large Scale Call
… sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities … of plants, microbes and microbial communities, global carbon and nutrient cycling, and biogeochemistry — questions of relevance to …
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Examples: Successful LOIs & Submissions
… metabolic flexibility? … Microbial contributions to soil carbon storage during simulated range shifts of plant-fungal … of simplified soil communities with high and low carbon use efficiency across differing moisture treatments … …
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Programs & Platform Leads
… of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In complement to the Community …
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Plant Program
… global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, … strategies that improve agricultural yields and support ecosystem health. By integrating cutting-edge technologies and … to the community.   … EcoFABs link genome biology to ecosystem processes through model laboratory ecosystems. They …
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Natural Prodcast Episode 22: Alison Narayan
… a biocatalyst. I would say those are the same in the Venn diagram. DAN UDWARY: Do you need less specificity to be a … enzymes that have those properties. Sometimes we’ll do engineering to improve the physical properties of a protein … run things in like little Eppendorf tubes, or in 96, or 384 well plates. But then the fun really starts when you’re …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted … an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et al. (2016) Ecogenomics and potential …
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Natural Prodcast Episode 23: Aaron Puri
… about. He works with methylotrophs, which are a group of carbon-fixing bacteria that I would say are are still fairly … the genes for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you … like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix …
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Natural Prodcast Episode 18: A CSP Primer
… to inoperate the data and pursue their science more efficiently. DAN UDWARY: Yeah. I’m just going to make the … and work within the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …
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Mission
… in studies of complex biological and environmental systems. We optimize our service to the community through … of genome biology and develop the genome-scale engineering technologies needed to design, build, and … significantly contribute to element and nutrient cycling, particularly those found in less well-understood …
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Products
Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a … change etc) and structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for expression profiling … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical …
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Natural Prodcast Episode 14: Nigel Mouncey
… that the JGI’s Annual User Meeting is coming up, August 30th through September 1st. Three days of great science, and … products projects that we had in my group which was bioengineering bio-process R&D, BBRD, a group of about 75 … really to learn about JGI, learn about the national lab system, doing some research then. Of course, I never worked …
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Natural Prodcast Episode 20: Brian Bachmann
… and using engineered biosynthetic pathways and enzyme systems to do synthetic analoging of some really complex … they had the same conserved polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: … with the synthetic biology community, with the metabolic engineering community because the skill sets are very …
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