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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  … You can view the status of your projects at any time by accessing various reports on the JGI Portal . Use the search …
Learn more
Partnerships Development Team
… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … these new interactions.  The PDT enables industry engagement through three primary routes:  … The CSP provides … Team Nigel Mouncey, JGI Director Trent Northen , JGI Metabolomics Science Program Head Yasuo Yoshikuni, JGI DNA …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to …
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Plant-Microbial Interactions Group
… influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene …
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Homepage
…   Gain access to omics technologies generating community data at zero cost — …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental … Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …
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Synthesis
… group and focused on new technologies and optimizing tools — including strain engineering — to make them more … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to the …
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