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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 … around the world. … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …
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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … and helping to concentrate it. But that’s the next project.  DAN: Thanks.  ALISON: We had talked a little bit … so we’ve been working with metals and in particular rare earth elements or Rare Earth metals with our cultures.  And …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to … bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and …
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Natural Prodcast Episode 6: Marc Chevrette
… where, among lots of other things, he works on the Tiny Earth project, which you’ll hear him describe. [ Go here to learn … MARC: Well, I’m really biased and I like the bugs in the microbiome. So a lot of my work is as focused on insects As …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … . Research Team    … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research … Towards a balanced view of the bacterial tree of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … such efforts should specify the collaborative nature of the project, and authorship is expected to include all those … Contact us Contact the Project Management Office at "[email protected]" …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as … will be the development of tools and infrastructure for microbiome data science, and the development of new … subject area. … The NMDC is tackling existing gaps in microbiome science through distributed data infrastructure …
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