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… to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … technologies available at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with …

… functions that shape ecosystems. By decoding the microbial DNA in natural environments, the Program provides a snapshot … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … Microbial Genomes and Plasmid Resources … Genomes Online Database … National Microbiome Data Collaborative … …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . …   355(6322):294-298 Paez-Espino D. et al. (2017) IMG/VR: a database of cultured and uncultured DNA Viruses and …

… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation … (or completes the form online) PM submits metadata to JGI database for shipping approval (n/a if using web-based form) …

All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values …

Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … request a JGI Single Sign On account at https://signon.jgi.doe.gov . This account can then be used to submit proposals, …

The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing the frontiers of …

… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … Office (IPO) and read the Guide to Partnering with DOE’s National Laboratories . … Recent Partnerships … The … JGI Metabolomics Science Program Head Yasuo Yoshikuni, JGI DNA Synthesis Science Program Head Ian Blaby, JGI DNA …

… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … and InterProScan. And all of those have ended up in the SMC database. There’s a web front end for it, and it’s just a …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments …

… efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …