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… advantages for farmers concerned with improving sustainable soil management practices. … In June 2020, the Department of … strain for the production of biofuels and bioproducts from low-cost gas feedstock. For more information about the … JGI Metabolomics Science Program Head Yasuo Yoshikuni, JGI DNA Synthesis Science Program Head Ian Blaby, JGI DNA …

… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. Later on, I’ll … in addition to sequencing, we offer metabolomics and also DNA synthesis. And we consider these capabilities a little …

… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … 80s and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – … produce secondary metabolites. Do you recognize this? DNA 🡺 RNA 🡺 Protein ALISON: This is central dogma. DNA to RNA to …

… in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our … MARC: That is a perfect way to put it. ALISON: She’s an international ambassador? MARC: Yeah, I believe it was 2012 when …

… below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of … Please include the appropriate Auspice Statement in any external publications, and include proposal Award DOIs following …

… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to identify, … by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and have expanded the …

The guest we have this week is Professor Cassandra Quave from Emory University, with joint appointments in the School … that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … drug from the microbes in that soil, there are now international regulations that provide a structure for ensuring …

… aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … The ranked proposal list, along with a recommendation from JGI management, is then forwarded to DOE for final …

… the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — … to analyze metabolites in environmental organisms, communities, and samples including state-of-the-art …

Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … analysis, visualization and interpretation using public datasets.  … The Integrated Microbial Genomes & Microbiomes … distribution of prokaryotic microbial genome and microbiome datasets. It includes JGI-sequenced and publicly available …

… functions that shape ecosystems. By decoding the microbial DNA in natural environments, the Program provides a snapshot … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …