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… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential … of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key to organisms' … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … in data analysis and secondary metabolism over the last decade or so. He’s involved with a lot of the common tools … similarity to a gene cluster with a known compound from the reference database: It must be identical. It must be that …

… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …

… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to …

… information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen … treatment, mitigation, or pollution, including biogas, greenhouse gases, climate change, wastewater treatment, … per- and polyfluoroalkyl substances (PFAS), and harmful algal blooms. Projects focused on the fundamental science of …

… plants and bring them back to the lab. The weedy grass was green millet (Setaria viridis), a small model grass with a … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these …

… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the … and contribute to the bioeconomy. Summary In the past decade, many breeding tools for eucalyptus have relied on …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … responsible for coming up with new strains and new process improvements and new ways to recover spinosyns. And so we … core science programs which are microbes, and fungi, and algae plants, synthetic biology. And so we have, I think, …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … to say it was like less than 10. Since, you know, a recent decade.  DAN: I’m sure that’s right.  Dan [post-edit]: Hey, … less in the same place we’ve probably been since the last decade. We have a lot more data. Obviously, there’s been a …

… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled … the  HudsonAlpha Institute for Biotechnology . An updated reference genome for  T. cacao has now been completed and …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, and …

… encoded on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris … Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …