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Natural Prodcast Episode 19: Bill Fenical
… this an awfully long time ago, and she’s been in her new job for a long time now, but I guess you all might not … seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s …
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Natural Prodcast Episode 23: Aaron Puri
JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these … at the University of Washington there’s a guy named Peter Greenberg , and in the medical school in the Department of … by Inverse Stable Isotopic Labeling . ACS Chem Biol. 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… analogy to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to … in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, … lineages of uncultivated genomes from the GEM catalog (in green) and previously existing reference genomes (in gray). …
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Plant Program
… plant-microbe interactions, advancing efforts to create renewable energy sources and bolster agricultural resilience. … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … mining-based approaches are that other than resistance genes, you have no way of knowing of whether or not a … encyclopedia of enzymes at Aldridge that I could use to buy green uricase or “Wittig-ase” or whatever I was looking for. …
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Metabolomics Program
… metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … and a list of scored metabolite matches associated with genes.  … Metabolomics Offerings & Capabilities … …
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DNA Synthesis Program
… cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and … These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA Synthesis … sequence-function relationships, advancing the discovery of new biosensors for biofuels and bioproducts. Efforts include …
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Natural Prodcast Episode 4: Nancy Keller
… example of probing fungi for natural products and finding new things. And so, really happy to have you here. And … of the food was bad from mold, but that’s all I really knew. I didn’t really think about it a lot. And so after I … with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than they …
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Data Policy
FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the … Data from projects that received samples before Sep 30, 2021 and are ongoing are subject to the 2-year …
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Natural Prodcast Episode 14: Nigel Mouncey
… natural products for agriculture, and his upcoming new role as the Society for Industrial Microbiology and … team who have been really looking at ways to express genes in organisms that haven’t been used for really any … Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual Genomics of Energy & Environment Meeting   …
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with access … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that … JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release … and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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