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… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust … to our users. This includes scaling the technologies and enabling state-of-the-art sample processing and sequencing … An assay used for profiling transcription factor binding sites across entire …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial …

… Outreach at JGI takes many forms: We offer internship opportunities through working directly with specific universities, continuing … and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental systems … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of …

… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the … user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. …

… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus …

… me to ask you about SMC and– DAN UDWARY: Yeah, I guess we reverse it, right? You can interview me, and otherwise, I’m … has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it … a ton of things that I know that we want to do in terms of enabling more comparative analysis and especially the …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on my self-imposed schedule. So, we’ll have to … And I really dove into microbial physiology and microbial genetics, and really away from chemistry and synthesizing …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … Plant microbiomes hold the amazing ability to influence plant development, fitness and …

… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … Yeah, so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you …