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Data Policy
FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … repositories (e.g. the Inventory of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) at the end … publications. … Read more about our data management practices and the resources we provide. … Data Policy … Legacy …
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Natural Prodcast Episode 4: Nancy Keller
… conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … I worked at a high school. And one of the things that I noticed is all the food that the students got was coming from … (SIMB) Natural Products meeting in San Diego in January 2020. You can find the podcast on Apple , Google , Spotify , …
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Metagenome-assembled-genomes recovered from the Arctic drift expedition MOSAiC
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Microbiome Data Science Team
… resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from … Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release … You can also contact [email protected] for advice!      … The deliverables can range from raw sequence …
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DNA Synthesis Program
Institute (JBEI), we are developing tools including ICE and DIVA to rapidly design combinatorial construct … insights into clade-specific novelties and expansions.  … ICE is an open source registry platform developed by the …
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User Support Analysis Group
JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome …
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Environmental Genomics Group
Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” … and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … upon their line of scientific inquiry by leveraging JGI experimental, computational and personnel resources for …
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Natural Prodcast Episode 11: Marnix Medema
MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene … by was that the project was a mixture, initially, of experimental and computational work. And that it involves … little bit more genetically distant where the BGCs may have drifted but they might still be making the same natural …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in … fuel growth. The Impact Over the last 40 years, summer sea ice in the Arctic has decreased by more than 30% in terms of … and cell death. Immediately upon transfer, the experimental samples exhibited significant stress with a …
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Scientific Advisory Committee
… overview of the JGI. The SAC is chartered to render advice, guidance, and counsel on the effective management and … at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects …
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