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Single Cell Research Group
… focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great … Phylogenetic diversity estimates show that the gap between …
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Metabolomics Program
… of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for … roles in processes such as nutrient cycling, plant-microbe interactions, and environmental responses. The program … into functional genomics. A key focus is understanding the interactions between  plants, microbes, and soils relevant …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and …
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Microbial Program
… of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key … terrestrial biogeochemical cycling and inter-organismal interactions, which are critical for advancing sustainable … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single …
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Frequently Asked Questions: Proposal Submission
… The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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DNA Synthesis Program
… the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … in advancing functional genomics, focusing on developing genetic systems that can address global energy and … Design-Build-Test-Learn cycle, helping researchers optimize genetic systems. By enabling these cutting-edge approaches, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … it’s like these molecules can just mediate so many kinds of interactions. And by understanding them, we can promote the … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …
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User Programs
… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …
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Natural Prodcast Episode 6: Marc Chevrette
… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s … MARC: Well, I’m really biased and I like the bugs in the microbiome. So a lot of my work is as focused on insects As … really similar to like human crops like corn. There’s low genetic diversity in the crop. So they’re susceptible to …
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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … robust high-yielding feedstock plants, using advanced genetic technology to accelerate the domestication of …
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Natural Prodcast Episode 5: Brad Moore
… Not a big leap, but then we began looking at microbiomes associated with various invertebrate organisms, … was fun having, you know, working with a student who was a geneticist, having them think like a chemist and thinking … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …
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Plant Program
… major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … the Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental …
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