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DNA Synthesis Program
… tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and plant … a stepwise approach for strain development, requiring cycles of construct design, building, and characterization. … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …
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Products
… physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a specific subset of free-living … sample, annotation ( IMG/M ), binning Depends on project Microbial Minimal Draft, Isolate Draft quality microbial …
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User Programs
… to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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FICUS
… on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …
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Natural Prodcast Episode 14: Nigel Mouncey
I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary … normally run into or interact with in the course of your daily work.  DAN: Sure.  NIGEL MOUNCEY: I think an …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … JGI and LanzaTech, a Skokie, Illinois-based company that recycles carbon emissions to make fuels and chemicals, …
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Scientific Advisory Committee
… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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