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… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job … to do something completely new. And that is to begin to study the organic chemistry of life in the sea. And he …

… is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the …

… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … Marcy. So I was wondering, how did you get interested in studying natural products?  MARCY: That is a great question …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … hold me accountable and yell at me if I slip again. My JGI coworkers are way too nice to yell at me, so that’s gonna be … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions …

… analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on … was responsible for the terabase scale data analysis in the cow rumen and sheep rumen metagenome projects. Standing at the …

Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation …

… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …

… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how … partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …

… challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …