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… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and … uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … are also used for micro-eukaryotes, in particular to study inter-organismal interactions. Novel approaches are …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …

… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … to microbiology, about drug discovery and why it’s so hard to succeed, and we talk about an ongoing project I’ve … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job …

… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How would … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As …

… management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … hold me accountable and yell at me if I slip again. My JGI coworkers are way too nice to yell at me, so that’s gonna be … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway … spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these …