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… for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find … what looked to be novel biosynthetic gene clusters, like completely new things that we haven’t seen before. And so … conducted genome mining on thousands of metagenome-derived genomes. Check out http://naturalprodcast.com for show notes …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …

… is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …

… DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … usually, these days, you’re probably going to do a complete genome sequence before you know you do a whole lot …   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes …

… conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … in love with the bacteria part of that. And so I decided to completely change gears and go and do a postdoc with a woman … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …

… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So … process. So it’s really important to submit everything most completely. And then, there’s different sections that …

… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … it’s very hard. And it’s still not something that we’ve completely been able to tackle. And so – ALISON: So I do …

… genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … capillary), researchers sequenced and assembled the first complete genome of an uncultured symbiont. The single cell … identify, and characterize more than 200 microbial genomes that were mapped to nearly 30 major previously …

… The majority of JGI projects come from the user community. Find out about JGI’s calls for … the JGI User Agreement will be an authorized representative from your institution (usually a legal counsel … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This …

… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … database which is now shared with the whole community in a completely free and open manner. But it is also … advancement in sort of both areas. And I suspect that no single change will resolve the problem. But that stepwise …