Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
      • Partnerships Development Team
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Synthesis
      • Metabolomics
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • IMG Group
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics Group
    • Committees
      • JGI User Executive Committee
      • Scientific Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Breadcrumb

  1. Home
  2. Search

Search

Results


Microbial Program
These insights are crucial for addressing key environmental challenges, such as improving soil health, carbon … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data …
Learn more
Natural Prodcast Episode 17: Cassandra Quave
… called The Plant Hunter , and I have to say it’s so awesome! For those of you want to understand more about natural products and drug discovery, or the challenges of academia, or if you want to understand what … copies of this and we were able to distribute it across the community. So that’s been used in supporting educational …
Learn more
Critical Assessment of Metagenome Interpretation: the second round of challenges
Learn more
Natural Prodcast Episode 12: Nadine Ziemert
… what’s an example where that happened, where your view was challenged? NADINE ZIEMERT: Good question. I don’t remember … fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …
Learn more
JGI Portals
… platforms are a key resource for the broader scientific community and require constant developments to meet the … … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … metadata, around the world. … The IMG/M system serves as a community resource for comparative analysis and annotation …
Learn more
Micro-Scale Applications Group
Learn more
Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
Learn more
Partnerships Development Team
… three primary routes:  … The CSP provides the scientific community at large with access to high-throughput sequencing … visit the Intellectual Property Office  here . … The Community Science Program … Strategic Partnership Projects … …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… than screening in the past, is in the types of pathogens or challenges where we’re putting these bugs and assays … Currie’s metagenomics research, enabled in part by JGI’s Community Science Program.] So that’s one example where we … always to talk to you. Thanks again. MARC: Yeah, awesome. Thanks so much. — DAN: I’m Dan Udwary, and you’ve …
Learn more
How to Submit Sequencing Samples
… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …
Learn more
Natural Prodcast Episode 24: Jackie Winter and SMC
… it your baby in being released and how this can help the community. DAN UDWARY: Yeah. So OK. So SMC is the Secondary … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … my machine in order to do it. [CHUCKLES] JACLYN WINTER: Challenge them. DAN UDWARY: I’m into it. Yeah, totally. …
Learn more
Natural Prodcast Episode 10: A Primer on Genome Mining
… environments. Like, bacteria make antibiotics in order to challenge or kill off competition, right? And plants do the … everybody uses, is called antiSMASH . And it is another community effort that’s been built up over the years and is … set of MAGs to date. Here, at JGI, we took more than 10,000 metagenomes, many of which were sequenced at JGI, and some …
Learn more

Pagination

  • First page « First
  • Previous page ‹‹
  • Page 1
  • Page 2
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Page 8
  • Page 9
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2025 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback