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Natural Prodcast Episode 16: Marcy Balunas
… best things that we do is work with this really great group of biologists that know what they’re doing much better … about something I can kind of see like the squid and the bacteria and how the chemistry is going back and forth … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …
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Natural Prodcast Episode 7: Ben Shen
… with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This interview is another one we recorded at … origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from bacteria, there’s … penicillin from the fungal species – probably told us that fungi could be very productive sources for, say, biological …
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Secondary Metabolites Program
… focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… our second season of Natural Prodcast. This first episode up is another primer episode. These are episodes where … find, things that are of interest. And usually, in terms of bacteria and secondary metabolism, those things that we want … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that …
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Natural Prodcast Episode 17: Cassandra Quave
… love and care. Yeah, and let’s see. I lead a research group at Emory, I teach classes here on food and health and … a check-up on me. And I wonder how that intersects with bacterial bioprospecting that is often done, where we’re … nothing for. We’re also working on organisms, pathogenic fungi like Candida aureus in the lab and we work on …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional …
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Natural Prodcast Episode 12: Nadine Ziemert
… Yeah, we’re doing this from home. And my own podcasting setup– and yours, too, Dan. DAN UDWARY: Yeah, you’re looking … they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are … a marine actinomycete bacterium. So they look kind of like fungi but also make these mycelia. They kind of look like …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This represents a … Foundry and use of JGI capabilities is free. The JGI supports remote users. Users conduct experiments in their own … libraries to the user. Most users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA … screening methodologies, and statistical frameworks for inferring genotype to phenotype associations. … For further details, please reach out to the Group Lead …
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New Lineages of Life Group
… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning …
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Natural Prodcast Episode 1: The Primer, Part 1
… natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your crazy Aunt … Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long … metabolism, and talking to the scientists who do the work to understand all of the amazing biological chemistry …
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