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… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies … sequence and assemble samples, such as those from soil and plants, our group researches the use and implementation of …

… and ultimately predict the main viral impacts in these microbiomes. … the range of virus-host interactions occurring in microbiomes, these omics data must be complemented with … Coclet C, Camargo AP, Roux S. (2024) MVP: a modular viromics pipeline to identify, filter, …

… Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …

… an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially …

… Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics … through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial … of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission …

… to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …

… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace … they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big deal now. You go to …

… has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes …

… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE …

… recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in … development and adoption of classroom modules Currently 206 genomes have been selected with 11 published manuscripts … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, …