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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
Learn more
Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon …
Learn more
Natural Prodcast Episode 16: Marcy Balunas
… kinds of biology, one of the best things that we do is work with this really great group of biologists that know what … say a clutch is probably the size of a golf ball and has 25 to 50 eggs. I’m guessing here.  DAN: Sure, sure.  MARCY: … noise from the metabolomics data. We’ve done a lot of work learning about how to use statistical analysis to prioritize …
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Natural Prodcast Episode 14: Nigel Mouncey
… to a regular schedule. I’m going to kick things off today with my interview with the Director of the Joint Genome … firstly set up a baseline process. And then really dig deeper into both aspects of the strain, as well as the … we’ve done a lot on our spinosyns. We had a huge amount of learnings to apply to this second product, the UK2A base …
Learn more
FICUS
… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must … available from all the facilities participating in the FY25 call, introduces the resources available from the …
Learn more
Natural Prodcast Episode 11: Marnix Medema
… pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in the … . So this is an algorithm that identifies, using machine learning models, that very tiny precursor peptide, encoding … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” …
Learn more
Micro-Scale Applications Group
… genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … with various microscopy techniques … Stable isotope probing metagenomics: … Single cell: … For further details, please …
Learn more
Natural Prodcast Episode 12: Nadine Ziemert
… secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in … Like me, she’s a genome miner and has been involved with the AntiSMASH and MIBiG projects. And I found her …
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User Programs
CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … and metabolomics. Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the FY27 …
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Natural Prodcast Episode 9: Roger Linington
… in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … It was designed to ensure equitable benefit sharing if any discoveries were made that were of value to the host … for Ray Andersen there, and had a very enjoyable time learning about natural products science. DAN:  Yeah, great. …
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Microbial Program
Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with microeukaryotes. The program also studies giant …
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Workforce Development & Education Outreach
… space.       Learn more about internship programs we work with:  … The JGI and UC Merced have had a long-standing … internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer …
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