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… of certain types of data to support their use by those generating data. The JGI Data Policy applies to research … this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. …

… As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then … put out some software called DeepBGC , which is a machine learning tool that tries to look at patterns of Pfams …

… pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in the … . So this is an algorithm that identifies, using machine learning models, that very tiny precursor peptide, encoding … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” …

… First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … have to do a 10,000-fold dilution to plate that out. The deeper you go in the cave, the less dilution. You can be … Allison Walker at Vanderbilt is coming up with machine learning techniques just to look at clusters and start to …

… out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … why I’m very excited. I think, among many, many major discoveries since the genomic revolution, to me, as a …

… Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with microeukaryotes. The program also studies giant …

… secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in … library, where you chop up the genome and put pieces into vectors into bacteria. And then you search for – re-search …

… are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , … the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls … Proposals whose scope was not previously negotiated with the JGI will only be accepted pending available …

… Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics … location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology … the Integrative Genomics Building (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon …

… cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA …

… the next few months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … Fungal plant, algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in …