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… of certain types of data to support their use by those generating data. The JGI Data Policy applies to research … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. … publication of the data. In short, those users not involved with the proposal under which the data were generated who …

… pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in the … . So this is an algorithm that identifies, using machine learning models, that very tiny precursor peptide, encoding … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” …

… As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then … put out some software called DeepBGC , which is a machine learning tool that tries to look at patterns of Pfams …

… First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … have to do a 10,000-fold dilution to plate that out. The deeper you go in the cave, the less dilution. You can be … Allison Walker at Vanderbilt is coming up with machine learning techniques just to look at clusters and start to …

… out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … why I’m very excited. I think, among many, many major discoveries since the genomic revolution, to me, as a …

… Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including those associated with microeukaryotes. The program also studies giant …

… episode 12 of Natural Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in … Like me, she’s a genome miner and has been involved with the AntiSMASH and MIBiG projects. And I found her … library, where you chop up the genome and put pieces into vectors into bacteria. And then you search for – re-search …

… are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , … Proposals whose scope was not previously negotiated with the JGI will only be accepted pending available capacity, technical review and scope negotiation with the JGI.  Investigators with grants funded by DOE-BER …

… location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology … the Integrative Genomics Building (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase …

… cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon …

… the next few months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … Fungal plant, algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in …