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Natural Prodcast Episode 18: A CSP Primer
… It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … hear about are some more of the details around that. Specifically, we’re going to talk about JGI’s Community Science … call, what are the deadlines for our large call. We have letters of intent. So there’s a letter of intent deadline. …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … and state-of-the-art sample processing.  Our Biodesign platform enables users to test hypotheses via designed and …
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Special Initiatives & Programs
… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for BERSS support through …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale … along with a recommendation from JGI management, is then forwarded to DOE for final approval. Following DOE approval, …
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Publication Policy
… The purpose of this policy is to establish communication norms around … research project are appropriately recognized and credited for their work, while also adhering to the authorship … collaborative nature of the project. Journal policies typically expect authorship to include all those contributing …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … international meeting on natural products, but as a new, I call it “incarnation”, for this series of meetings. It’s …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … separately at individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, …
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Products
… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … . Not all products are available for all proposal calls.   Please review the call language carefully to ensure …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … interactions, evolution, and adaptation, ultimately informing strategies for environmental monitoring, …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … And you know, 25 hours a day we’re at the beach practically. It was just – it was sort of our place to be. And … has been a lot of fun for us in recent years. Started in 2015, when two things happened. One, a new graduate student …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … a bad location for a little baby. Rooming in, is what they call it, right? Alison Takemura: Yeah. Crashing. Maybe it’s …
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