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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely unknown and underutilized by industry. When … Our User Programs entail a competitive, proposal-based process including peer review. The process is …
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Natural Prodcast Episode 18: A CSP Primer
… “DOE” is the United States Department of Energy, which is a federal agency that does all kids of things around nuclear … that other researchers work with the JGI. So, submitting proposals, and then working on projects through the CSP … places where you need sampling permits and significant budget to get these samples. Do they have expertise and …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … normally run into or interact with in the course of your daily work.  DAN: Sure.  NIGEL MOUNCEY: I think an …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP …   Learn more about our individual calls and other opportunities to work with the JGI …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … MassIVE repository . Not all products are available for all proposal calls.   Please review the call language carefully … not on this list, or to discuss experimental design for a proposal, we encourage you to contact the relevant JGI  …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … In this episode, Dan and Alison discuss the basics of genome … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … with Professor Ben Shen, from The Scripps Research Institute (TSRI) in Jupiter, Florida. Ben and Alison and I …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on my self-imposed schedule. So, we’ll have to … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … scientific research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The … and evaluated based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis …
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User Executive Committee Charter
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that … and their science including technical capabilities offered, proposal review procedures, and the annual user meeting. The … Make recommendations to the JGI regarding calls for proposals, including focus areas, eligibility, timing, and …
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