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… Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements … environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked … tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on …

… for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for metabolomics, at least 22 samples are … utilize a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 … seeks to reduce U.S. gasoline consumption by 20% within 10 years through increased efficiency and diversification of …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … underwater vehicles. Brad: You did not! Alison: I did, like 2016, I think. Yes, it was just so funny to hear how they’re …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, C., Sorensen, P.O., …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … boss is Nigel Mouncey, and he’s the director of the Joint Genome Institute. And so anybody who’s listened to other … had a high throughput screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a …

… The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based artist Nigel Sussman. …

… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard …

… led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin production, and … The Impact With increased lignin and iron, engineered poplar can be used to develop bioproducts for industrial … Plants for the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … Nature . The mushroom has a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its … the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the …