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… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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… The JGI’s DNA Synthesis Program supports a wide range of projects, … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … The DNA Synthesis Program plays a central role in advancing … of new biofuels and sustainable biochemicals. The DNA Synthesis Program aims to generate large datasets to …
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… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) … hours. FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … to analyze complex genomic datasets. [Download PDF] FY 2014 Overall Sequencing Progress, Updated Quarterly Quarter …
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… and other omics technologies. The exponential growth of DNA sequencing data, coupled with recent computational … the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the …
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… The JGI’s data stewardship expertise and infrastructure enable a … accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will … be reused for further science. Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the …
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… must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version . The recent updates were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User …
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… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …
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… through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., … T ., Klenk H. P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree … for new branches on the tree of life. Science. 346:698-9 (2014). Ivanova N.N., Schwientek P., Tripp H.J., Rinke C., …
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… needed to prepare and ship samples for sequencing by the JGI. Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …
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… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable … Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting. …
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… The JGI Advisory Committee (JAC) is convened by the JGI Director to provide guidance on the Institute’s … committees, such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal …
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… colleagues, to quantify heavy isotope incorporation into DNA by active microbial populations (Hungate et al. 2015). … With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a …
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