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Microbiome Data Science Team
… data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … grand challenges in Biology, with a special focus on microbiome research.  These efforts include exploration of … Kyrpides NC. et al. (2016) Microbiome Data Science: Understanding Our Microbial Planet. Trends Microbiol. …
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Metagenome Program
… sustainability, and many other applications. By understanding how microbes contribute to ecosystem … the Program helps drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements …
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Metabolomics Program
… systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems … development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial …
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Mission
DOE science mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated … to support BER's mission of achieving a predictive understanding of complex biological, earth, and … innovations for bioenergy and bioproduction, enhance understanding of natural environmental processes relevant to …
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Data Ecosystem
… will be the development of tools and infrastructure for microbiome data science, and the development of new … genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are designated DOE Office of … subject area. … The NMDC is tackling existing gaps in microbiome science through distributed data infrastructure …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… producing molecules that are helpful to the plants. And so, understanding those broader environmental and ecological … can just mediate so many kinds of interactions. And by understanding them, we can promote the health and well-being … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …
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New Lineages of Life Group
… coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research … Towards a balanced view of the bacterial tree of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses …
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Who We Are
… as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Workforce Development & Education Outreach
… more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and … at UC Berkeley is a program designed to foster a profound understanding of research methodologies within the realm of …
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Microbial Program
… those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … novel genes, protein families, and pathways, enhancing our understanding of evolutionary diversification and microbial … around the world. … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …
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Environmental Genomics Group
… capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem … Team    … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: …
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Single Cell Research Group
… by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat …
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