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The Metagenome Program uses advanced sequencing technologies to … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes … effort aimed to develop standards, processes, and infrastructure for an integrated microbiome data ecosystem. … …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome … So he could see really into this– so he could look into the structure, really seeing that. And I’m always just looking … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation …

Our research is focused on the discovery and characterization of novel bacterial, … to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, … So, I’ve always known Roger as an expert in natural product structure elucidation, but more recently, he’s been leading … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

The IMG group owns and maintains integral components of JGI’s … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within … resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. …

The Micro-Scale Applications group explores the genetic makeup of natural microbial communities …

… into the lab, it was already basically there. We were just seeking out the last few pieces and trying to understand the … a community effort of putting together the natural product structures that are known. I forget how many structures are … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes … so no programming knowledge and no dedicated compute infrastructure is required to perform computational analysis. …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards … Scientist Program is for faculty-level scientists who are seeking to build upon their line of scientific inquiry by …