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… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The IMG group owns and maintains integral components of JGI’s … and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … of Oceanography in San Diego. Bill is a pioneer of marine natural products, getting into the ocean and looking … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … They get digested and they have all kinds of unfavorable properties, although saying that is a little bit unfair, … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …

The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

The User Support Analysis group provides computational analysis for new technology … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …