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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … Y., Visel A., Whitman W. B., Garrity G. M., Eisen J. A., Hugenholtz P., Pati A., Ivanova N. N., Woyke T ., Klenk H. …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Phil Hugenholtz
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … of if there’s anything kind of in my normal day-to-day life where there are 87,000 kinds. What fraction of those …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … might be as critical or it might be as big a part of its life as metabolizing sugars, but it’s something that we …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … datasets sequenced at the JGI. IMG/M is also open to scientists worldwide for the annotation, analysis, and …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … And then I was talking at the same time also with some Australian colleague who’s working on structural biology of …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … lot about chemistry. And he has been a good friend in my life. And so I’m very happy to be here and have Eric sitting …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … and there is a lot of literature around enzymes from thermophilic organisms where their peak activity is at an elevated …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) … Viral EcoGenomics & Applications (VEGA)  …   The JGI is represented at conferences year …
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