Search

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … ALISON TAKEMURA: So Nadine, what got you interested in studying natural products? NADINE ZIEMERT: Like almost … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … we had this– I had this idea while sitting in my bedroom in Montreal where my industry job was of evolving pathways one … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions …

The IMG group owns and maintains integral components of JGI’s production workflow, … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within … resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. …

… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …

… management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee …

… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job … to do something completely new. And that is to begin to study the organic chemistry of life in the sea. And he …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation …

In late June, Kathleen Lail, a member of JGI’s Sample … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …