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Natural Prodcast Episode 10: A Primer on Genome Mining
… who also do genome mining. We’ve got a great, fun bunch of little shows lined up, and I’m really looking forward to … searches, but antiSMASH took, basically, all of the known things that were out there and created some good rule … come from all kinds of disparate environments. There’s some marine. There’s some soil samples. There’s human gut …
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Natural Prodcast Episode 19: Bill Fenical
… of Oceanography in San Diego. Bill is a pioneer of marine natural products, getting into the ocean and looking … You have a JGI project going with us that we want to talk a little bit about. It’s sort of early stages. But I think … the ocean. And I would point out there was almost nothing known, absolutely nothing known, which was exciting but also …
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Natural Prodcast Episode 8: Eric Schmidt
Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin … modified Peptides.” You’ll have to use your imagination a little bit to really make that make sense as an acronym, but … grade list of goals in life: on that list are being a marine biologist and being a chemist, and it’s actually …
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Natural Prodcast Episode 12: Nadine Ziemert
… end, we somehow have the big goal of making that process a little more effective than it is now. Or a little more– … quality. Yeah, for sure. NADINE ZIEMERT: Yeah, Dan… it’s a marine actinomycete bacterium. So they look kind of like … obligate marine. There’s so far no species or no strains known that really grow in freshwater. But they’re actually …
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Natural Prodcast Episode 11: Marnix Medema
Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison … forces instead of to make two competing tools. If we had known about your tool, Dan, we would have contacted you as … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work …
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Natural Prodcast Episode 14: Nigel Mouncey
Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get back … been working in the Department of Energy. I really wasn’t known to them and they weren’t known to me.  DAN: Sure.  … Yeah. So every year we hold this meeting and we really attract just world renowned speakers to talk about the …
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Natural Prodcast Episode 15: Katherine Duncan
… wouldn’t it be cool to look at these– it was actually marine invertebrates there– but look at these things in the … been talking to a few different people about. So tell us a little bit about your perspective on that kind of technique … we had to try and figure out what was there. Like, was it a known metabolite? Was it something new? And we could only do …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … useful! DAN: Among many other things, Ben is maybe best known as an expert in enediynes – that’s a class of natural … out better ways to produce them. Do you want to talk a little bit about that project and how that got started? BEN: …
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Sequencing Submission Requirements for DNA Synthesis
… add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… with episode 13 of National Prodcast. This continues our little section on international genome miners, and today we … have Francisco Barona-Goméz, or Paco, as he prefers to be known among friends in natural products. He’s from Langebio … clinics were kind of kidnapped from nature without paying attention to the evolutionary biological relationships from …
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