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The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … a starting point for the analysis of viral genome fragments derived from metagenomic samples … IMG/PR serves as a …

… diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering … genome shotgun sequencing using long-read sequencing. Exact library types and quality of finished product depend on … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …

… annotations, and function distribution. These are derived from isolates and single cells. This effort uncovers … capability of microbial communities based on their metagenome sequence, in the context of reference isolate … of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data …

… as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in … to then work with further. So for example, we’ve built a library of flavin independent monooxygenases with the help … with our collaboration with JGI , we basically designed a library that includes hundreds of different flavin-dependent …

… and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, …

… specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within … resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates genome and metagenome datasets provided by IMG users with a …

… way of making proteins, with a ribosome. Then, some other enzymes chop the protein into smaller pieces, and other … a photo of John, we found one from the 70s in the Scripps library, and in it he’s got shoulder-length hippie hair. So, … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  …

And we then researched and made something called a fosmid library, where you chop up the genome and put pieces into … And then you search for – re-search for these biosynthetic enzymes that we think must be similar within the fosmid … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your … you updated as your samples move through QC and into the library and sequencing pipelines.  You will receive … such as sample IDs and names, QC results, SRA accessions, library names, and protocol and platform details. The Sample …

… what you can expect from your results as well as our library standards. … Metabolite Analysis & Metabolomics …

… management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee …