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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get back to a regular schedule. I’m … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … in any living organism are proteins, which are made up of chains of amino acids. “Peptide” is just another word for a … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … to get out there as soon as possible. Not one of our normal interviews, but instead it’s two interviews in one. My new … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, … Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … One, a new graduate student joined my group. His name is Patrick Brunson. And he wanted to work on microalgae. Now, …
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