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… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The Viral Genomics Group is …

… The CSP Functional Genomics call is to enable users to perform … genomics research and to help them translate genomic information into biological function.  The emphasis is on … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … provides insights into microbial diversity and metabolic potential, with implications for energy production, … The Metagenome Program focuses on the high-throughput sequencing of …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust … the JGI’s focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … favorite topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me … In this episode, Dan and Alison discuss the basics of genome mining, as we get ready to talk to some of the …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

… the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …