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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi … fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses cutting-edge sequencing … while also encouraging community engagement and data exchange. … Mycocosm … Phycocosm … Fungal & Algal Program in …
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by …
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Plant-Microbial Interactions Group
… diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … or low phosphorus), and how cell identity impacts this response. We will eventually construct a bioenergy plant … ‘omics methods. Here we were able to capture both plant and fungal expression patterns in root cross-sections. … …
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Metabolomics Program
It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … a variety of environments. ENVnet allows us to uncover globally distributed molecules with conserved structures, …
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Mission
… large-scale data and professional expertise to support the global research community in studies of complex biological … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new … that aim to understand biogenic contributions to the global nutrient cycles, as well as atmospheric particle …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong … group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction … (2016) Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses.  Nature . 537:689-93. … …
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Products
… to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using … (incl location in genome, coding/vs non, syn vs non-syn aa change etc) and structural rearrangements, alignment files …
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Plant Program
… delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing … with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable … It also tackles challenges posed by environmental change, focusing on plant resilience — highlighting the …
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Natural Prodcast Episode 11: Marnix Medema
… grad student with Michael. And we did it together. Did the global analysis of biosynthetic gene clusters across, well, … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a … an antifungal. It could also be perhaps eliciting a response by another bacterium, for example. But at least we …
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User Advisory Committees
… operations and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer … Committee … DNA Synthesis Science User Advisory Committee … Fungal & Algal Program User Advisory Committee … Informatics …
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Natural Prodcast Episode 8: Eric Schmidt
… where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans … , I think you’ll have heard how a lot of us who work in fungal natural products, especially in the old days, saw how … and it turns out it’s pretty engineerable – you can change the protein to some extent, and end up with a …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you should go back and listen to the Nancy … relevant! I promise!), talk about how genome sequencing has changed genome mining over the years, and we talk about a …
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