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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … strains. This approach allows for the identification of key functional traits that have direct applications in …
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panels and advocates of Program …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … de novo assembly. For counting: text file of gene counts (mapped against reference transcriptome or de novo assembly), …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the … critical cost barriers to sustainable, economically viable production of bio-based products and advanced biofuels. The …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and … modern descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new … processes that control the environmental fate of key elements with an impact on BER’s energy and …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … by bacteria, fungi, algae and plants. These compounds are key to organisms' interactions with their environments and …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … and then to natural product biosynthesis. So one of the key ideas behind EvoMining is that we exploited the actual …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you … Keller interview, where we talked a lot about that. A nice map of the Aflatoxin biosynthetic gene cluster and its …
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Plant Program
… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … The program is working to expand genomic resources for key plant species, enhancing our understanding of plant …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … providing deeper insights into functional genomics. A key focus is understanding the interactions between  plants, …
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