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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases … metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new computationally enabled approach … are producing data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* …
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Data Policy
… of this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … or metabolomics projects: data are subject to a  one-year embargo .  For each data or analysis product (raw or … … For DNA synthesis projects: data are subject to a  two-year embargo starting at construct or strain delivery.  …
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Microbiome Data Science Team
… of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of … Acids Res.  45(D1):D457-D465. Paez-Espino, D. et al. (2016) Uncovering Earth’s virome.  Nature   536:425-30 Kyrpides NC. et al. (2016) Microbiome Data Science: Understanding Our Microbial …
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User Executive Committee Charter
… and bring forward user suggestions and concerns; Provide feedback and make recommendations on how the JGI Science … been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Terms are 3 years …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… try to understand the biosynthetic pathway or to help identify the compound that they were interested in. But nowadays, … on the backs of people who’ve done a lot of work over the years. We have a pretty good idea of what the different … reviews of genome mining: Ziemert, Alanjary, and Weber’s 2016 overview of genome mining (open access) The …
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Natural Prodcast Episode 6: Marc Chevrette
… was at the Broad Institute in Cambridge, Mass. for a couple years before joining Warp Drive. And what kind of pushed me … to be involved in signaling. We’re not perfect at identifying what these pathways are yet. So there’s still a lot to … with large collections of new microbes and new activities, feeds into some of your other research interests, Mark, …
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User Programs
Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the FY27 call Sept. 9, 2025 Jan. 29, 2026 Review Date June 2025 …
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Natural Prodcast Episode 14: Nigel Mouncey
… science, and all online and free. We had to cancel last year’s event due to COVID, but this year we’re holding the … fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which really … express clusters metabolomics to be able to actually identify and possibly even quantify the products coming from these …
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New Lineages of Life Group
… genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We … components. Science, 356 (6333), 82-85 Schulz et al. (2016) A Rickettsiales symbiont of amoebae with ancient …
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Natural Prodcast Episode 5: Brad Moore
… advisor.  Brad: Oh my goodness. Those were good years, Dan!  Dan: For too many years. Brad: And now look, … cool because the work has gone so much more than just identifying genes to that toxin, but it’s opened up this whole … underwater vehicles. Brad: You did not! Alison: I did, like 2016, I think. Yes, it was just so funny to hear how they’re …
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Approved Proposals
… view a downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the …
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Natural Prodcast Episode 4: Nancy Keller
… 3 here ), which you should be able to find earlier in the feed, the secondary metabolism field has been dominated for … in the Peace Corps – I was there for about three and a half years – I worked at a high school. And one of the things … today who said “Oh, the ITS which we thought would identify to species”… he’s now found that some fungi have …
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