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… candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …

… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s … efficiency and scalability. Read more about DAP-seq in this science feature. …

… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …

… The JGI’s data stewardship expertise and infrastructure enable a … to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … from a single investment will be reused for further science.  Notices Data Portal files will be inaccessible …

… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) … hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… The Community Science Program (CSP) provides the scientific community at … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … first undergo technical review by JGI staff, while the DOE ensures that they meet DOE mission relevance .  During …

… The JGI’s Science Programs offer support to users and their research … of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for … the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to …

… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … our collaborations and capabilities to enable great science that will help solve energy and environmental …

… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team …