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… support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of …

Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to …

To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data … environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that …

… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new …

SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … of publications and allowing connections between all systems to maximize the impact of user research. The crucial …

… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to …

The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. …

Our data platforms are a key resource for the broader scientific … unified access to all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters (BGCs) …

… approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …