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The IMG group owns and maintains integral components of JGI’s … (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial … Genomes group is focused on: Developing state-of-the-art data processing and analysis pipelines for the …
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Data produced and released by the US Department of Energy … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to … JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) and outside repositories (e.g. NCBI SRA or GenBank; …
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To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data … environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that …
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… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …
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… technologies. The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … Science 355(6322):294-298 Paez-Espino D. et al. (2017) IMG/VR: a database of cultured and uncultured DNA Viruses …
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The JGI has a strong interest in seeing that the data produced by the facility result in scientific … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … of publications and allowing connections between all systems to maximize the impact of user research. The crucial …
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… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to …
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… approaches to assess microbial activity across ecosystems. By studying microbial communities and their … Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …
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The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … directly isolated from environmental samples. … The IMG/M system serves as a community resource for comparative … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …
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SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, …
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… of Science through high performance computing (HPC) and data analysis. The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function. To jointly …
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