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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … Embargo : A period in which data is not publicly available in JGI systems or outside …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource … for scientific exploration, granting access to diverse datasets that deepen our understanding of how organisms interact …
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Microbiome Data Science Team
… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and …
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Data Policy & Support
… Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, tools like artificial intelligence … JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… analogy to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to … now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … known things that were out there and created some good rule sets and put it all together in one package so that it …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a … broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission … and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a session via the …
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New Lineages of Life Group
… eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then … of microbes on Earth. This ongoing census helps reveal new lineages and functional capabilities in the microbial …
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Industry Engagement Program
… ensure U.S. energy dominance by integrating supercomputers, datasets and AI agents to solve key national challenges. The … generator, the JGI has a key role to play in providing high-quality, structured and curated data to support AI … partner to perform a defined scope of work using the JGI’s unique facilities, equipment, and personnel. If a U.S. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … I understand. And they’ve taken all of the really good high-quality genomes and run antiSMASH on those and put them into … databases, which will generate as soon as we have the new sets of data completely populated. And that database will …
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Natural Prodcast Episode 9: Roger Linington
… or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … that most entries were looked at more at once, and so the quality – the data quality – was reasonably high. And yeah, … there is a high degree of overlap between those two data sets, which we have not yet recognized. So. DAN:  It’s one …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable … energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of …
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