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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which … & compatibility, and signatures of horizontal gene transfer. … The SMC provides complete sequence and …
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Natural Prodcast Episode 18: A CSP Primer
… over there, with a few more questions specific to secondary metabolites. I hope both versions are worth listening to! If … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform …
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CSP Large Scale Call
… is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …
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Institutional User Agreements
… early will prevent disruption and delays on the work. The transfer of a proposal from one commercial institution to a … will be required to assume responsibility for all material transfers. *University of California Campus : An Appendix … to an active 2024 User Agreement or JGI BDLUA. MATERIAL TRANSFER AGREEMENT (MTA):  Before work can begin, an MTA …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The …
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Natural Prodcast Episode 16: Marcy Balunas
… are those– they make chemistry! And so they – secondary metabolites, specialized metabolites, however we want to … where there are more bacteria there is more horizontal transfer. And so it’s beneficial then to have secondary … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …
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Examples: Successful LOIs & Submissions
Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … genetic interactions for improved growth at elevated temperatures … Adaptive strategies in a cosmopolitan and … of the gene regulatory networks governing terpenoid-mediated plant environment interactions to enable advanced …
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Metabolomics
… and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and … At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … types of environments (e.g. soil, lake).  A wide range of metabolites are identified using LC-MS/MS methods optimized …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release … of a successful sequencing project. … Utilization or transfer of any genetic resource may be covered by local, …
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Natural Prodcast Episode 19: Bill Fenical
… into the secondary metabolism of some more novel marine bacteria. You know, I first met Bill as a postdoc working … seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … do the full genomes for us. So fortunately, the secondary metabolite component of the JGI, people are interested in …
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