Results
… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once … research to support and conduct. I already told you what a CSP is, but one other program I think we mention is FICUS, …
Learn more
… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal. Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …
Learn more
… The CSP Functional Genomics call is to enable users to perform …
Learn more
… For the CSP Large Scale call, a Letter of Intent (LOI) is required …
Learn more
… platforms, tools and data for deciphering regulatory networks, and refining experimental approaches to explore … and Streptomyces lysate systems. Deciphering regulatory networks of secondary metabolite biosynthesis: We have … of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, and signatures of …
Learn more
… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Elucidation of the gene regulatory networks governing terpenoid-mediated plant environment …
Learn more
… target is based on 98% of the total available hours. FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, … Goal Goal (hours)** Actual Total Actual % Goal FY 2020 Total 250.0 290.492 116% 7,932 5,616 70.8% Q1 2020 …
Learn more
… of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim … metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a … frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes. …
Learn more
… fundamental things, like, are we waking them up? Are they metabolically active and slowly ticking away at these … if we’ve woken them up or if they were slowly ticking away metabolically, way down under the ocean in Antarctica. Dan … at all that space in the data of– if you look at molecular networks and how much is characterized and how much is …
Learn more
… resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from … Nature Biotechnol. 39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through …
Learn more
… the user and no granting of funds. Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …
Learn more
… of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … about it, the only way a primary metabolite or a primary metabolic pathway is good for anything, it is if the final … the feeling, we have is that if you have in these molecular networks, nodes that are not so highly diversified, for …
Learn more

